3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08912

Details:

PFam ID : PF08912

PFam Domain Description : Rho Binding

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 37

Average sequence length: 63.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08912	A7RJ72_NEMVE_7_114	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08912	B7Q4S9_IXOSC_844_916	100

Sequence based PCA Plot of the family - PF08912 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay