3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08846

Details:

PFam ID : PF08846

PFam Domain Description : Domain of unknown function (DUF1816)

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 70

Average sequence length: 66.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08846	Q7NFG0_GLOVI_7_81	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08846	Q7NFG0_GLOVI_7_81	100

Sequence based PCA Plot of the family - PF08846 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=9 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay