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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08840
Details:

PFam ID : PF08840

PFam Domain Description : BAAT / Acyl-CoA thioester hydrolase C terminal

Number of Sequence in 50% Dataset : 108

Number of Sequence in Full Dataset : 229

Average sequence length: 186.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF08840A6QA97_SULNB_121_26685.9
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF08840A0B8E7_METTP_193_423100
Sequence based PCA Plot of the family - PF08840 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay