3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08826

Details:

PFam ID : PF08826

PFam Domain Description : DMPK coiled coil domain like

Number of Sequence in 50% Dataset : 13

Number of Sequence in Full Dataset : 38

Average sequence length: 54.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08826	B3RIR6_TRIAD_443_599	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08826	A7UTG5_ANOGA_341_388	100

Sequence based PCA Plot of the family - PF08826 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay