3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08793

Details:

PFam ID : PF08793

PFam Domain Description : 2-cysteine adaptor domain

Number of Sequence in 50% Dataset : 19

Number of Sequence in Full Dataset : 51

Average sequence length: 35.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08793	E2CTZ7_ISKNV_122_158	94.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08793	VF380_IIV3_7_48	100

Sequence based PCA Plot of the family - PF08793 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay