3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08763

Details:

PFam ID : PF08763

PFam Domain Description : Voltage gated calcium channel IQ domain

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 59

Average sequence length: 33.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08763	A1X596_9VIRU_36_176	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08763	C4QG27_SCHMA_1520_1549	98.2

Sequence based PCA Plot of the family - PF08763 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay