3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08761

Details:

PFam ID : PF08761

PFam Domain Description : dUTPase

Number of Sequence in 50% Dataset : 75

Number of Sequence in Full Dataset : 256

Average sequence length: 140.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08761	C3RLJ1_9FIRM_3_154	98.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08761	C9DGK3_9CAUD_9_178	100

Sequence based PCA Plot of the family - PF08761 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=48 Length=8
Motif2 Start=5 Length=18
Motif3 Start=139 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay