3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08760

Details:

PFam ID : PF08760

PFam Domain Description : Domain of unknown function (DUF1793)

Number of Sequence in 50% Dataset : 35

Number of Sequence in Full Dataset : 136

Average sequence length: 165.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08760	D3BS96_POLPA_40_119	58.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08760	A6SEE4_BOTFB_528_708	100

Sequence based PCA Plot of the family - PF08760 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=63 Length=11
Motif2 Start=100 Length=8
Motif3 Start=114 Length=8
Motif4 Start=169 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay