3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08738 Details: PFam ID : PF08738 PFam Domain Description : Gon7 family Number of Sequence in 50% Dataset : 14 Number of Sequence in Full Dataset : 51 Average sequence length: 94.4 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08738A7SX95_NEMVE_164_328No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08738D1ZA04_SORMK_6_101100 Sequence based PCA Plot of the family - PF08738 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=60 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF08738
PFam Domain Description : Gon7 family
Number of Sequence in 50% Dataset : 14
Number of Sequence in Full Dataset : 51
Average sequence length: 94.4
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER