3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08716

Details:

PFam ID : PF08716

PFam Domain Description : nsp7 replicase

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 20

Average sequence length: 79.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08716	B2BW31_9GAMC_1138_1429	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08716	B8QAY6_9GAMC_3361_3443	100

Sequence based PCA Plot of the family - PF08716 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay