3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08663

Details:

PFam ID : PF08663

PFam Domain Description : HalX domain

Number of Sequence in 50% Dataset : 40

Number of Sequence in Full Dataset : 53

Average sequence length: 67.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08663	Q757Z3_ASHGO_1_116	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08663	B0R6X3_HALS3_116_187	100

Sequence based PCA Plot of the family - PF08663 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay