3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08621 Details: PFam ID : PF08621 PFam Domain Description : RPAP1-like, N-terminal Number of Sequence in 50% Dataset : 14 Number of Sequence in Full Dataset : 119 Average sequence length: 48.0 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08621B0CV15_LACBS_93_14138.4 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08621F0W007_9STRA_119_167100 Sequence based PCA Plot of the family - PF08621 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 1 motifsMotif1 Start=1 Length=36 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF08621
PFam Domain Description : RPAP1-like, N-terminal
Number of Sequence in 50% Dataset : 14
Number of Sequence in Full Dataset : 119
Average sequence length: 48.0
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER