3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08483

Details:

PFam ID : PF08483

PFam Domain Description : IstB-like ATP binding N-terminal

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 123

Average sequence length: 29.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08483	D9S8B2_FIBSS_193_342	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08483	Q07XJ7_SHEFN_6_25	100

Sequence based PCA Plot of the family - PF08483 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay