3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08480

Details:

PFam ID : PF08480

PFam Domain Description : Disaggregatase related

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 30

Average sequence length: 182.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08480	Q464V5_METBF_225_402	60

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08480	Q464V5_METBF_225_402	93.1

Sequence based PCA Plot of the family - PF08480 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=126 Length=8
Motif2 Start=10 Length=8
Motif3 Start=138 Length=8
Motif4 Start=106 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay