3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08470

Details:

PFam ID : PF08470

PFam Domain Description : Nontoxic nonhaemagglutinin C-terminal

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 11

Average sequence length: 137.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08470	Q79E33_CLOBO_1_54	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08470	D2KKE7_CLOBO_998_1159	100

Sequence based PCA Plot of the family - PF08470 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay