3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08452

Details:

PFam ID : PF08452

PFam Domain Description : DNA polymerase family B exonuclease domain, N-terminal

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 12

Average sequence length: 20.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08452	C6JXN8_ANOAR_1_46	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08452	Q91MW8_LSDV_1_22	100

Sequence based PCA Plot of the family - PF08452 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay