3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08412

Details:

PFam ID : PF08412

PFam Domain Description : Ion transport protein N-terminal

Number of Sequence in 50% Dataset : 55

Number of Sequence in Full Dataset : 106

Average sequence length: 61.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08412	A0BD54_PARTE_13_62	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08412	E4XAS8_OIKDI_12_88	100

Sequence based PCA Plot of the family - PF08412 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=12 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay