3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08351

Details:

PFam ID : PF08351

PFam Domain Description : Domain of unknown function (DUF1726)

Number of Sequence in 50% Dataset : 40

Number of Sequence in Full Dataset : 258

Average sequence length: 91.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08351	E8VXK2_VIBVU_68_169	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08351	E8VXK2_VIBVU_68_169	100

Sequence based PCA Plot of the family - PF08351 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=27
Motif2 Start=31 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay