3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08278

Details:

PFam ID : PF08278

PFam Domain Description : DNA primase DnaG DnaB-binding

Number of Sequence in 50% Dataset : 89

Number of Sequence in Full Dataset : 276

Average sequence length: 126.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08278	C5BMY8_TERTT_497_633	96.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08278	Q2JDI2_FRASC_475_612	98.1

Sequence based PCA Plot of the family - PF08278 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=6 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay