3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08267

Details:

PFam ID : PF08267

PFam Domain Description : Cobalamin-independent synthase, N-terminal domain

Number of Sequence in 50% Dataset : 80

Number of Sequence in Full Dataset : 653

Average sequence length: 292.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08267	PCDBI_HUMAN_3_58	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08267	METE_DICDI_3_360	100

Sequence based PCA Plot of the family - PF08267 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=12 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay