3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08246

Details:

PFam ID : PF08246

PFam Domain Description : Cathepsin propeptide inhibitor domain (I29)

Number of Sequence in 50% Dataset : 188

Number of Sequence in Full Dataset : 1463

Average sequence length: 58.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08246	B0EJB1_ENTDI_17_114	94.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08246	D3BTA4_POLPA_32_130	100

Sequence based PCA Plot of the family - PF08246 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=40

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay