3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08241

Details:

PFam ID : PF08241

PFam Domain Description : Methyltransferase domain

Number of Sequence in 50% Dataset : 2188

Number of Sequence in Full Dataset : 9345

Average sequence length: 94.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08241	C3NJJ6_SULIN_1_50	88.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08241	Q118E8_TRIEI_9_58	99.9

Sequence based PCA Plot of the family - PF08241 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=2 Length=8
Motif2 Start=26 Length=11
Motif3 Start=64 Length=11
Motif4 Start=93 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay