3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08213

Details:

PFam ID : PF08213

PFam Domain Description : Mitochondrial domain of unknown function (DUF1713)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 83

Average sequence length: 32.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08213	D1Y799_9BACT_126_199	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08213	D7LRL8_ARALL_102_125	98.7

Sequence based PCA Plot of the family - PF08213 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay