3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08199

Details:

PFam ID : PF08199

PFam Domain Description : Bacteriophage E2-like protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 5

Average sequence length: 25.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08199	Q9YR02_9VIRU_1_47	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08199	Q9MBK9_BPLC2_1_37	100

Sequence based PCA Plot of the family - PF08199 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay