3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08174

Details:

PFam ID : PF08174

PFam Domain Description : Cell division protein anillin

Number of Sequence in 50% Dataset : 46

Number of Sequence in Full Dataset : 134

Average sequence length: 142.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08174	F2UMK0_9EUKA_664_848	28.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08174	E5SBL3_TRISP_88_239	57

Sequence based PCA Plot of the family - PF08174 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=74 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay