3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08166 Details: PFam ID : PF08166 PFam Domain Description : NUC202 domain Number of Sequence in 50% Dataset : 4 Number of Sequence in Full Dataset : 13 Average sequence length: 63.9 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08166B3S2V0_TRIAD_615_674No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08166C3XZR5_BRAFL_613_68090.3 Sequence based PCA Plot of the family - PF08166 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=22 Length=17Motif2 Start=10 Length=8Motif3 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF08166
PFam Domain Description : NUC202 domain
Number of Sequence in 50% Dataset : 4
Number of Sequence in Full Dataset : 13
Average sequence length: 63.9
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER