3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08103

Details:

PFam ID : PF08103

PFam Domain Description : Uperin family

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 7

Average sequence length: 14.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08103	E6ZVM0_9BASI_280_473	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08103	UPE37_UPEMJ_1_17	100

Sequence based PCA Plot of the family - PF08103 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay