3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08072

Details:

PFam ID : PF08072

PFam Domain Description : BDHCT (NUC031) domain

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 13

Average sequence length: 37

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08072	B3V6N9_9EURY_1_27	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08072	Q28GG7_XENTR_340_369	100

Sequence based PCA Plot of the family - PF08072 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay