3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08071 Details: PFam ID : PF08071 PFam Domain Description : RS4NT (NUC023) domain Number of Sequence in 50% Dataset : 6 Number of Sequence in Full Dataset : 172 Average sequence length: 36.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08071B3V6N9_9EURY_1_2760 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF08071Q3LW17_BIGNA_3_40100 Sequence based PCA Plot of the family - PF08071 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=1 Length=8Motif2 Start=14 Length=11 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF08071
PFam Domain Description : RS4NT (NUC023) domain
Number of Sequence in 50% Dataset : 6
Number of Sequence in Full Dataset : 172
Average sequence length: 36.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER