3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08067

Details:

PFam ID : PF08067

PFam Domain Description : ROKNT (NUC014) domain

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 11

Average sequence length: 35.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08067	Q23S17_TETTH_28_111	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08067	Q7ZXK8_XENLA_1_40	100

Sequence based PCA Plot of the family - PF08067 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay