3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07984

Details:

PFam ID : PF07984

PFam Domain Description : Domain of unknown function (DUF1693)

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 68

Average sequence length: 237.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07984	F2UKY8_9EUKA_24_228	54.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07984	Q4SSX6_TETNG_21_143	98.5

Sequence based PCA Plot of the family - PF07984 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8
Motif3 Start=70 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay