3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07826

Details:

PFam ID : PF07826

PFam Domain Description : IMP cyclohydrolase-like protein

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 114

Average sequence length: 210.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07826	E0XUE7_9DELT_25_140	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07826	C6CZZ5_PAESJ_12_233	100

Sequence based PCA Plot of the family - PF07826 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=22 Length=11
Motif2 Start=75 Length=8
Motif3 Start=1 Length=8
Motif4 Start=101 Length=14

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay