3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07822

Details:

PFam ID : PF07822

PFam Domain Description : Neurotoxin B-IV-like protein

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 3

Average sequence length: 36.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07822	B8I9J3_METNO_410_478	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07822	NXB4_CERLA_1_55	100

Sequence based PCA Plot of the family - PF07822 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=14 Length=8
Motif2 Start=23 Length=18
Motif3 Start=5 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay