3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07814

Details:

PFam ID : PF07814

PFam Domain Description : Wings apart-like protein regulation of heterochromatin

Number of Sequence in 50% Dataset : 58

Number of Sequence in Full Dataset : 106

Average sequence length: 285.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07814	B7Q8A2_IXOSC_1_149	24.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07814	E5SHV1_TRISP_699_1066	99.0

Sequence based PCA Plot of the family - PF07814 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=18
Motif2 Start=280 Length=8
Motif3 Start=338 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay