3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07804 Details: PFam ID : PF07804 PFam Domain Description : HipA-like C-terminal domain Number of Sequence in 50% Dataset : 114 Number of Sequence in Full Dataset : 853 Average sequence length: 81.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07804Q4SCG5_TETNG_5_136No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07804B9Z472_9NEIS_234_336100 Sequence based PCA Plot of the family - PF07804 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=6 Length=8Motif2 Start=23 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF07804
PFam Domain Description : HipA-like C-terminal domain
Number of Sequence in 50% Dataset : 114
Number of Sequence in Full Dataset : 853
Average sequence length: 81.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER