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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07804
Details:

PFam ID : PF07804

PFam Domain Description : HipA-like C-terminal domain

Number of Sequence in 50% Dataset : 114

Number of Sequence in Full Dataset : 853

Average sequence length: 81.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF07804Q4SCG5_TETNG_5_136No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF07804B9Z472_9NEIS_234_336100
Sequence based PCA Plot of the family - PF07804 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=6 Length=8
Motif2 Start=23 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay