3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07802

Details:

PFam ID : PF07802

PFam Domain Description : GCK domain

Number of Sequence in 50% Dataset : 17

Number of Sequence in Full Dataset : 58

Average sequence length: 67.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07802	D7KBG4_ARALL_261_302	56.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07802	D7KPB1_ARALL_104_177	98.2

Sequence based PCA Plot of the family - PF07802 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=16 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay