3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07764

Details:

PFam ID : PF07764

PFam Domain Description : Omega Transcriptional Repressor

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 6

Average sequence length: 47.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07764	B7Q180_IXOSC_1_38	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07764	F0VYH7_STRG2_1_67	100

Sequence based PCA Plot of the family - PF07764 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay