3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07749 Details: PFam ID : PF07749 PFam Domain Description : Endoplasmic reticulum protein ERp29, C-terminal domain Number of Sequence in 50% Dataset : 63 Number of Sequence in Full Dataset : 142 Average sequence length: 91.1 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07749D5GHK2_TUBMM_290_33885.4 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07749C4Y7P8_CLAL4_275_381100 Sequence based PCA Plot of the family - PF07749 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=99 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF07749
PFam Domain Description : Endoplasmic reticulum protein ERp29, C-terminal domain
Number of Sequence in 50% Dataset : 63
Number of Sequence in Full Dataset : 142
Average sequence length: 91.1
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER