3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07747

Details:

PFam ID : PF07747

PFam Domain Description : MTH865-like family

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 46

Average sequence length: 73.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07747	D1Z074_METPS_27_103	57.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07747	Q0W1I9_UNCMA_26_102	100

Sequence based PCA Plot of the family - PF07747 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay