3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07742 Details: PFam ID : PF07742 PFam Domain Description : BTG family Number of Sequence in 50% Dataset : 23 Number of Sequence in Full Dataset : 110 Average sequence length: 108.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07742Q4PBF7_USTMA_1_14086.3 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF07742E1G8L3_LOALO_1_107100 Sequence based PCA Plot of the family - PF07742 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=1 Length=18Motif2 Start=43 Length=11Motif3 Start=88 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF07742
PFam Domain Description : BTG family
Number of Sequence in 50% Dataset : 23
Number of Sequence in Full Dataset : 110
Average sequence length: 108.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER