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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07742
Details:

PFam ID : PF07742

PFam Domain Description : BTG family

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 110

Average sequence length: 108.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF07742Q4PBF7_USTMA_1_14086.3
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF07742E1G8L3_LOALO_1_107100
Sequence based PCA Plot of the family - PF07742 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=18
Motif2 Start=43 Length=11
Motif3 Start=88 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay