3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07732

Details:

PFam ID : PF07732

PFam Domain Description : Multicopper oxidase

Number of Sequence in 50% Dataset : 121

Number of Sequence in Full Dataset : 3409

Average sequence length: 93.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07732	A4H3Q7_LEIBR_34_110	69.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07732	E9J5C6_SOLIN_1_73	99.7

Sequence based PCA Plot of the family - PF07732 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=11
Motif2 Start=135 Length=11
Motif3 Start=70 Length=8
Motif4 Start=113 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay