3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07731

Details:

PFam ID : PF07731

PFam Domain Description : Multicopper oxidase

Number of Sequence in 50% Dataset : 267

Number of Sequence in Full Dataset : 2632

Average sequence length: 133.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07731	A5PFJ4_9PEZI_285_342	95.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07731	A9UC96_PLEER_1_50	99.9

Sequence based PCA Plot of the family - PF07731 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=40 Length=8
Motif2 Start=149 Length=8
Motif3 Start=57 Length=8
Motif4 Start=199 Length=14

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay