3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07695

Details:

PFam ID : PF07695

PFam Domain Description : 7TM diverse intracellular signalling

Number of Sequence in 50% Dataset : 459

Number of Sequence in Full Dataset : 642

Average sequence length: 202.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07695	B7FYL2_PHATC_208_422	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07695	A1ZKH3_9BACT_199_422	96.8

Sequence based PCA Plot of the family - PF07695 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8
Motif3 Start=33 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay