3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07675

Details:

PFam ID : PF07675

PFam Domain Description : Cleaved Adhesin Domain

Number of Sequence in 50% Dataset : 38

Number of Sequence in Full Dataset : 50

Average sequence length: 150.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07675	C9LK77_9BACT_1249_1437	91.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07675	C9LK77_9BACT_1249_1437	97.9

Sequence based PCA Plot of the family - PF07675 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=28
Motif2 Start=74 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay