3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07669

Details:

PFam ID : PF07669

PFam Domain Description : Eco57I restriction-modification methylase

Number of Sequence in 50% Dataset : 122

Number of Sequence in Full Dataset : 411

Average sequence length: 110.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07669	B2V779_SULSY_153_264	92.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07669	E4S2V5_BORBJ_725_887	99.7

Sequence based PCA Plot of the family - PF07669 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=23 Length=8
Motif2 Start=2 Length=20
Motif3 Start=62 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay