3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07659

Details:

PFam ID : PF07659

PFam Domain Description : Domain of Unknown Function (DUF1599)

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 119

Average sequence length: 61.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07659	Q1IQC9_ACIBL_107_123	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07659	B3QQU9_CHLP8_20_81	95.7

Sequence based PCA Plot of the family - PF07659 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=20 Length=8
Motif2 Start=2 Length=17
Motif3 Start=47 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay