3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07656

Details:

PFam ID : PF07656

PFam Domain Description : KWG Leptospira

Number of Sequence in 50% Dataset : 111

Number of Sequence in Full Dataset : 464

Average sequence length: 16.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07656	Q1IQC9_ACIBL_107_123	86.3

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07656	A1ZQI3_9BACT_237_253	100

Sequence based PCA Plot of the family - PF07656 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay