3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07646

Details:

PFam ID : PF07646

PFam Domain Description : Kelch motif

Number of Sequence in 50% Dataset : 127

Number of Sequence in Full Dataset : 300

Average sequence length: 48.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07646	TEA1_SCHPO_187_236	84.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07646	C3ZRY1_BRAFL_4_49	98.9

Sequence based PCA Plot of the family - PF07646 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=35 Length=8
Motif2 Start=1 Length=8
Motif3 Start=26 Length=8
Motif4 Start=13 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay