3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07639

Details:

PFam ID : PF07639

PFam Domain Description : YTV

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 67

Average sequence length: 42.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07639	D5ST13_PLAL2_101_133	40

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07639	F0ST44_PLABD_87_130	100

Sequence based PCA Plot of the family - PF07639 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay