3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07537

Details:

PFam ID : PF07537

PFam Domain Description : CamS sex pheromone cAM373 precursor

Number of Sequence in 50% Dataset : 42

Number of Sequence in Full Dataset : 118

Average sequence length: 290.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07537	E4KPN5_9LACT_64_151	63.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07537	D6XYW4_BACIE_66_408	100

Sequence based PCA Plot of the family - PF07537 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=88 Length=8
Motif4 Start=39 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay